SRX116448
GSM831020: K562 SIRT6

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
SIRT6

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562-SIRT6 ChIP-seq
cell type
K562 erythrocytic leukaemia cells (ATCC CCL-243)
chip antibody
Abcam,ab62739

Sequenced DNA Library

library_name
GSM831020: K562_SIRT6
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg19

Number of total reads
35334879
Reads aligned (%)
71.1
Duplicates removed (%)
40.8
Number of peaks
893 (qval < 1E-05)

hg38

Number of total reads
35334879
Reads aligned (%)
71.7
Duplicates removed (%)
39.1
Number of peaks
599 (qval < 1E-05)

Base call quality data from DBCLS SRA