Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
REST

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562-REST ChIP-seq
cell type
K562 erythrocytic leukaemia cells (ATCC CCL-243)
chip antibody
Millipore,17-641

Sequenced DNA Library

library_name
GSM831015: K562_REST
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg19

Number of total reads
40751189
Reads aligned (%)
27.8
Duplicates removed (%)
70.6
Number of peaks
4630 (qval < 1E-05)

hg38

Number of total reads
40751189
Reads aligned (%)
30.0
Duplicates removed (%)
68.6
Number of peaks
4639 (qval < 1E-05)

Base call quality data from DBCLS SRA