Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
PHF8

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562-PHF8 ChIP-seq
cell type
K562 erythrocytic leukaemia cells (ATCC CCL-243)
chip antibody
Bethyl,A301.772A

Sequenced DNA Library

library_name
GSM831009: K562_PHF8_2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg19

Number of total reads
40253007
Reads aligned (%)
48.3
Duplicates removed (%)
38.7
Number of peaks
26077 (qval < 1E-05)

hg38

Number of total reads
40253007
Reads aligned (%)
49.4
Duplicates removed (%)
37.6
Number of peaks
26054 (qval < 1E-05)

Base call quality data from DBCLS SRA