SRX116434
GSM831006: K562 P300

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
EP300

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562-P300 ChIP-seq
cell type
K562 erythrocytic leukaemia cells (ATCC CCL-243)
chip antibody
Bethyl,A300-358A

Sequenced DNA Library

library_name
GSM831006: K562_P300
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
46747576
Reads aligned (%)
82.2
Duplicates removed (%)
73.5
Number of peaks
1212 (qval < 1E-05)

hg19

Number of total reads
46747576
Reads aligned (%)
81.6
Duplicates removed (%)
75.3
Number of peaks
1265 (qval < 1E-05)

Base call quality data from DBCLS SRA