Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
WHSC1

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562-NSD2 ChIP-seq
cell type
K562 erythrocytic leukaemia cells (ATCC CCL-243)
chip antibody
Abcam,ab73539

Sequenced DNA Library

library_name
GSM831005: K562_NSD2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg38

Number of total reads
44482803
Reads aligned (%)
86.1
Duplicates removed (%)
7.1
Number of peaks
564 (qval < 1E-05)

hg19

Number of total reads
44482803
Reads aligned (%)
85.5
Duplicates removed (%)
8.0
Number of peaks
617 (qval < 1E-05)

Base call quality data from DBCLS SRA