SRX116429
GSM831001: K562 KAT3A-CBP

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CREBBP

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562-KAT3A/CBP ChIP-seq
cell type
K562 erythrocytic leukaemia cells (ATCC CCL-243)
chip antibody
Abcam,ab2832

Sequenced DNA Library

library_name
GSM831001: K562_KAT3A-CBP
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
40074919
Reads aligned (%)
63.9
Duplicates removed (%)
17.3
Number of peaks
2724 (qval < 1E-05)

hg19

Number of total reads
40074919
Reads aligned (%)
63.2
Duplicates removed (%)
18.3
Number of peaks
2991 (qval < 1E-05)

Base call quality data from DBCLS SRA