SRX116420
GSM830992: K562 EZH2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
EZH2

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562-EZH2 ChIP-seq
cell type
K562 erythrocytic leukaemia cells (ATCC CCL-243)
chip antibody
Active motif,39901

Sequenced DNA Library

library_name
GSM830992: K562_EZH2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg19

Number of total reads
33912492
Reads aligned (%)
20.7
Duplicates removed (%)
56.5
Number of peaks
217 (qval < 1E-05)

hg38

Number of total reads
33912492
Reads aligned (%)
21.4
Duplicates removed (%)
55.3
Number of peaks
208 (qval < 1E-05)

Base call quality data from DBCLS SRA