Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
SETDB1

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562-ESET ChIP-seq
cell type
K562 erythrocytic leukaemia cells (ATCC CCL-243)
chip antibody
Santa cruz,166621X

Sequenced DNA Library

library_name
GSM830991: K562_ESET
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg19

Number of total reads
44152883
Reads aligned (%)
76.2
Duplicates removed (%)
11.1
Number of peaks
1471 (qval < 1E-05)

hg38

Number of total reads
44152883
Reads aligned (%)
78.4
Duplicates removed (%)
9.3
Number of peaks
1276 (qval < 1E-05)

Base call quality data from DBCLS SRA