SRX116415
GSM830987: K562 CBX8

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CBX8

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562-CBX8 ChIP-seq
cell type
K562 erythrocytic leukaemia cells (ATCC CCL-243)
chip antibody
Bethyl,A300-882A

Sequenced DNA Library

library_name
GSM830987: K562_CBX8
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
38335462
Reads aligned (%)
83.5
Duplicates removed (%)
71.0
Number of peaks
786 (qval < 1E-05)

hg19

Number of total reads
38335462
Reads aligned (%)
82.3
Duplicates removed (%)
73.6
Number of peaks
727 (qval < 1E-05)

Base call quality data from DBCLS SRA