Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
NR3C1

Cell type

Cell type Class
Breast
Cell type
ZR-75-1
Primary Tissue
Breast
Tissue Diagnosis
Adenocarcinoma Ductal

Attributes by original data submitter

Sample

source_name
ZR-75-1 breast cancer cell line
cell line
ZR-75-1
cell type
Ascites from a ductal carcinoma of the breast
treatment
Dexamethasone
concentration
100nM
time
30 minutes
replicate
replicate 2
antibody
GR E-20X sc-1003 Santa Cruz
growth proptocol
For maintenance cells were cultured in RPMI containing 2mM L-glutamine supplemented 10% calf serum, 1mM sodium pyruvate, 1X non-essential amino acids, and 1% penicillin-streptomycin

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
40620432
Reads aligned (%)
84.8
Duplicates removed (%)
7.1
Number of peaks
23392 (qval < 1E-05)

hg38

Number of total reads
40620432
Reads aligned (%)
86.2
Duplicates removed (%)
6.2
Number of peaks
23542 (qval < 1E-05)

Base call quality data from DBCLS SRA