Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Notch1

Cell type

Cell type Class
Blood
Cell type
T-ALL
NA
NA

Attributes by original data submitter

Sample

source_name
T-ALL Notch1
cell type
Notch1-IC over-expressing tumors (T-ALL)
chip antibody
Notch1

Sequenced DNA Library

library_name
GSM859512: T-ALL Notch1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
19617485
Reads aligned (%)
98.0
Duplicates removed (%)
24.0
Number of peaks
22723 (qval < 1E-05)

mm9

Number of total reads
19617485
Reads aligned (%)
97.8
Duplicates removed (%)
24.1
Number of peaks
22586 (qval < 1E-05)

Base call quality data from DBCLS SRA