Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
DP mnase input
cell type
CD4+/8+ Double Positive (DP) cells
chip antibody
none (input)

Sequenced DNA Library

library_name
GSM859503: DP mnase input replicate 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
18117685
Reads aligned (%)
94.2
Duplicates removed (%)
16.3
Number of peaks
9508 (qval < 1E-05)

mm9

Number of total reads
18117685
Reads aligned (%)
93.9
Duplicates removed (%)
16.3
Number of peaks
9513 (qval < 1E-05)

Base call quality data from DBCLS SRA