Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CBX2

Cell type

Cell type Class
Kidney
Cell type
293
Primary Tissue
Kidney
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
293T-Rex, CBX2 ChIP
cell line
293T-Rex
transgene
Flag-HA (empty vector)
chip antibody
CBX2
chip antibody vendor
Abcam
chip antibody lot
GR6867-1

Sequenced DNA Library

library_name
GSM855020: CBX2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
14968778
Reads aligned (%)
79.4
Duplicates removed (%)
15.2
Number of peaks
264 (qval < 1E-05)

hg38

Number of total reads
14968778
Reads aligned (%)
80.2
Duplicates removed (%)
14.7
Number of peaks
197 (qval < 1E-05)

Base call quality data from DBCLS SRA