SRX113589
GSM855017: RING1B; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
RNF2

Cell type

Cell type Class
Kidney
Cell type
293
Primary Tissue
Kidney
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
293T-Rex, RING1B ChIP
cell line
293T-Rex
transgene
Flag-HA (empty vector)
chip antibody
RING1B
chip antibody vendor
Bethyl
chip antibody lot
A302-869A-1

Sequenced DNA Library

library_name
GSM855017: RING1B
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
22971059
Reads aligned (%)
99.0
Duplicates removed (%)
8.0
Number of peaks
643 (qval < 1E-05)

hg19

Number of total reads
22971059
Reads aligned (%)
98.3
Duplicates removed (%)
9.4
Number of peaks
874 (qval < 1E-05)

Base call quality data from DBCLS SRA