SRX113338
GSM853490: E0-8 sc ChIPSeq 1 and 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
sc

Cell type

Cell type Class
Embryo
Cell type
0-8h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E0-8
developmental stage
E0-8
antibody name
sc
manufacturer
White Lab
catalog
N/A
strain
ISO1

Sequenced DNA Library

library_name
GSM853490: E0-8_sc_ChIPSeq_1 and 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
43912531
Reads aligned (%)
79.0
Duplicates removed (%)
31.9
Number of peaks
0 (qval < 1E-05)

dm3

Number of total reads
43912531
Reads aligned (%)
79.3
Duplicates removed (%)
29.1
Number of peaks
0 (qval < 1E-05)

Base call quality data from DBCLS SRA