SRX113303
GSM851706: USP ChIPSeq 1 and 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
usp

Cell type

Cell type Class
Embryo
Cell type
0-12h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E0-12
developmental stage
E0-12
antibody name
USP
manufacturer
White Lab
catalog
N/A
strain
USP, transgenic

Sequenced DNA Library

library_name
GSM851706: USP_ChIPSeq_1 and 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
23077083
Reads aligned (%)
85.8
Duplicates removed (%)
24.1
Number of peaks
0 (qval < 1E-05)

dm3

Number of total reads
23077083
Reads aligned (%)
86.1
Duplicates removed (%)
22.6
Number of peaks
0 (qval < 1E-05)

Base call quality data from DBCLS SRA