Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

source_name
CNS
developmental stage
CNS
antibody name
FAIRE
manufacturer
White Lab
catalog
N/A
strain
ISO1

Sequenced DNA Library

library_name
GSM851705: FAIRE_ChIPSeq_1 and 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

dm6

Number of total reads
44403565
Reads aligned (%)
53.0
Duplicates removed (%)
59.2
Number of peaks
14217 (qval < 1E-05)

dm3

Number of total reads
44403565
Reads aligned (%)
53.3
Duplicates removed (%)
58.3
Number of peaks
13506 (qval < 1E-05)

Base call quality data from DBCLS SRA