Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
TEX
NA
NA

Attributes by original data submitter

Sample

source_name
TEX cells
cell line
TEX
treatment
vehicle
antibody
Immunoglobulin G

Sequenced DNA Library

library_name
GSM854149: TEX_IgG
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg38

Number of total reads
49483696
Reads aligned (%)
89.1
Duplicates removed (%)
23.5
Number of peaks
1870 (qval < 1E-05)

hg19

Number of total reads
49483696
Reads aligned (%)
88.0
Duplicates removed (%)
25.1
Number of peaks
1446 (qval < 1E-05)

Base call quality data from DBCLS SRA