Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
KH2 mES
cell type
C57BL/6 (female) x 129/S (male)
passage
passage 10-18
antibody
input

Sequenced DNA Library

library_name
GSM851692: mES input ChIP-Seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

mm10

Number of total reads
24837085
Reads aligned (%)
98.2
Duplicates removed (%)
9.0
Number of peaks
569 (qval < 1E-05)

mm9

Number of total reads
24837085
Reads aligned (%)
98.0
Duplicates removed (%)
9.0
Number of peaks
646 (qval < 1E-05)

Base call quality data from DBCLS SRA