Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Aicda

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
Activated B cells
strain
C57BL/6 AID-GFP
cell type
in vitro activated B cells
chip target
AID
chip antibody
Santa Cruz rabbit polyclonal anti-AID antibody (Catalog No. sc-25620)

Sequenced DNA Library

library_name
GSM851558: ActivatedBCell_AID_rep2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
101601201
Reads aligned (%)
86.3
Duplicates removed (%)
47.5
Number of peaks
5337 (qval < 1E-05)

mm9

Number of total reads
101601201
Reads aligned (%)
86.2
Duplicates removed (%)
47.5
Number of peaks
5132 (qval < 1E-05)

Base call quality data from DBCLS SRA