Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
NR3C1

Cell type

Cell type Class
Blood
Cell type
RS4-11
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Lymphocytic

Attributes by original data submitter

Sample

source_name
RS4;11_Dex_1hr
cell line
RS4;11
cell type
acute lymphoblastic leukemia cell line
treated with
10 nM dexamethasone for 1 hour
chip antibody
GR (Novus, NB300-731; Cell Signaling, D8H2; Abcam ab3579)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
29295144
Reads aligned (%)
61.2
Duplicates removed (%)
29.2
Number of peaks
3931 (qval < 1E-05)

hg38

Number of total reads
29295144
Reads aligned (%)
62.8
Duplicates removed (%)
28.1
Number of peaks
3863 (qval < 1E-05)

Base call quality data from DBCLS SRA