SRX112549
GSM850828: patientB input; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Acute myeloid leukemia
NA
NA

Attributes by original data submitter

Sample

source_name
patient B input
cell type
t(8;21) AML patient Blast cells

Sequenced DNA Library

library_name
GSM850828: patientB_input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
7293928
Reads aligned (%)
97.1
Duplicates removed (%)
19.2
Number of peaks
229 (qval < 1E-05)

hg19

Number of total reads
7293928
Reads aligned (%)
96.3
Duplicates removed (%)
19.5
Number of peaks
234 (qval < 1E-05)

Base call quality data from DBCLS SRA