SRX111799
GSM847702: E8-16 HP1 ChIPSeq 1 and 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Su(var)205

Cell type

Cell type Class
Embryo
Cell type
8-16h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E8-16
strain
iso1 (y; bw cn sp)
developmental stage
E8-16
antibody name
HP1
manufacturer
White Lab
catalog
N/A

Sequenced DNA Library

library_name
GSM847702: E8-16_HP1_ChIPSeq_1 and 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
35489354
Reads aligned (%)
95.5
Duplicates removed (%)
43.9
Number of peaks
0 (qval < 1E-05)

dm3

Number of total reads
35489354
Reads aligned (%)
96.5
Duplicates removed (%)
39.2
Number of peaks
0 (qval < 1E-05)

Base call quality data from DBCLS SRA