Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pancreas
Cell type
Pancreas
MeSH Description
A nodular organ in the ABDOMEN that contains a mixture of ENDOCRINE GLANDS and EXOCRINE GLANDS. The small endocrine portion consists of the ISLETS OF LANGERHANS secreting a number of hormones into the blood stream. The large exocrine portion (EXOCRINE PANCREAS) is a compound acinar gland that secretes several digestive enzymes into the pancreatic ductal system that empties into the DUODENUM.

Attributes by original data submitter

Sample

source_name
input
tissue
pancreas
gender
male
background strain
ROSA26 Tam-ERCre
antibody
none

Sequenced DNA Library

library_name
GSM846874: input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

mm10

Number of total reads
14250098
Reads aligned (%)
97.7
Duplicates removed (%)
5.3
Number of peaks
595 (qval < 1E-05)

mm9

Number of total reads
14250098
Reads aligned (%)
97.5
Duplicates removed (%)
5.5
Number of peaks
633 (qval < 1E-05)

Base call quality data from DBCLS SRA