SRX110936
GSM847243: OCI-Ly8-H3K4me3-ChIPseq; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Blood
Cell type
OCI-LY8
NA
NA

Attributes by original data submitter

Sample

source_name
Diffuse Large B-cell Lymophoma
cell line
OCI-Ly8
chip antibody
H3K4me3

Sequenced DNA Library

library_name
GSM847243: OCI-Ly8-H3K4me3-ChIPseq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
36542418
Reads aligned (%)
88.3
Duplicates removed (%)
83.0
Number of peaks
20105 (qval < 1E-05)

hg19

Number of total reads
36542418
Reads aligned (%)
87.9
Duplicates removed (%)
83.8
Number of peaks
20099 (qval < 1E-05)

Base call quality data from DBCLS SRA