Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Blood
Cell type
OCI-LY1
NA
NA

Attributes by original data submitter

Sample

source_name
Diffuse Large B-cell Lymophoma
cell line
OCI-Ly1
chip antibody
H3K4me3

Sequenced DNA Library

library_name
GSM847242: OCI-Ly1-H3K4me3-ChIPseq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg38

Number of total reads
29398918
Reads aligned (%)
98.7
Duplicates removed (%)
36.9
Number of peaks
32355 (qval < 1E-05)

hg19

Number of total reads
29398918
Reads aligned (%)
98.5
Duplicates removed (%)
37.0
Number of peaks
32284 (qval < 1E-05)

Base call quality data from DBCLS SRA