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Install and launch IGV before selecting data to visualize
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For dm6
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For dm3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: Input control
wikigenes
PDBj
CellType: Muscle cells
ATCC
MeSH
RIKEN BRC
SRX110789
GSM846935: Input DNA 8-10h mef2 replicate 2; Drosophila melanogaster; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
Input control
Antigen
Input control
Cell type
Cell type Class
Embryo
Cell type
Muscle cells
NA
NA
Attributes by original data submitter
Sample
source_name
muscle FAC sorted from dissociated embryos
genetic background
Dmef2-GAL4}
time point
08 to 10h AEL
chip antibody
None
Sequenced DNA Library
library_name
GSM846935: Input DNA 8-10h mef2 replicate 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer IIx
Where can I get the processing logs?
Read processing pipeline
log
dm6
Number of total reads
14543262
Reads aligned (%)
95.8
Duplicates removed (%)
7.9
Number of peaks
4964 (qval < 1E-05)
dm3
Number of total reads
14543262
Reads aligned (%)
95.8
Duplicates removed (%)
6.9
Number of peaks
6104 (qval < 1E-05)
Base call quality data from
DBCLS SRA