SRX110783
GSM846929: H3K4me3 ChIP-seq from Drosophila muscle cells; Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Embryo
Cell type
Muscle cells
NA
NA

Attributes by original data submitter

Sample

source_name
muscle FAC sorted from dissociated embryos
genetic background
Dmef2-GAL4}
time point
06 to 18h AEL
chip antibody
H3K4me3 (ab8580, abcam)
chip antibody manufacturer
abcam

Sequenced DNA Library

library_name
GSM846929: H3K4me3 ChIP-seq from Drosophila muscle cells
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
35029531
Reads aligned (%)
56.0
Duplicates removed (%)
45.5
Number of peaks
7305 (qval < 1E-05)

dm3

Number of total reads
35029531
Reads aligned (%)
56.1
Duplicates removed (%)
44.9
Number of peaks
7481 (qval < 1E-05)

Base call quality data from DBCLS SRA