SRX110774
GSM846920: Pol II ChIP-seq from 2-4 h wild type embryos, 4H8 antibody, replicate 1; Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

source_name
Oregon R (wild type)
genetic background
Oregon R
time point
02 to 04h AEL
chip antibody
Pol II (CTD48H, Millipore)
chip antibody manufacturer
Millipore

Sequenced DNA Library

library_name
GSM846920: Pol II ChIP-seq from 2-4 h wild type embryos, 4H8 antibody, replicate 1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
40289302
Reads aligned (%)
95.5
Duplicates removed (%)
42.6
Number of peaks
6660 (qval < 1E-05)

dm3

Number of total reads
40289302
Reads aligned (%)
95.6
Duplicates removed (%)
40.2
Number of peaks
7026 (qval < 1E-05)

Base call quality data from DBCLS SRA