Curated Sample Data


Genome
dm3
Antigen Class
RNA polymerase
Antigen
RNA polymerase II
Cell type Class
Unclassified
Cell type
Unclassified

Cell type information


NA
NA

Attributes by Original Data Submitter


source_name
Oregon R (wild type)
genetic background
Oregon R
time point
02 to 04h AEL
chip antibody
Pol II (CTD48H, Millipore)
chip antibody manufacturer
Millipore

Metadata from Sequence Read Archive

Library Description


library_name
GSM846920: Pol II ChIP-seq from 2-4 h wild type embryos, 4H8 antibody, replicate 1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Platform Information


instrument_model
Illumina Genome Analyzer IIx

External Database Query

Logs in read processing pipeline


Number of total reads
40289302
Reads aligned (%)
95.6
Duplicates removed (%)
40.2
Number of peaks
7026 (qval < 1E-05)

Sequence Quality Data from DBCLS SRA