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Install and launch IGV before selecting data to visualize
For mm10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For mm9
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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Analyze
For mm10
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For mm9
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For mm10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For mm9
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: Kmt2a
wikigenes
PDBj
CellType: MLL-AF9 leukemic cell
ATCC
MeSH
RIKEN BRC
SRX110650
GSM846042: MLL1 mouse ChIPSeq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
Kmt2a
Cell type
Cell type Class
Blood
Cell type
MLL-AF9 leukemic cell
NA
NA
Attributes by original data submitter
Sample
source_name
MLL-AF9 transfromed blasts
strain
C57BL/6
cell origin
5-FU treated BM cells transduced with Flag-tagged MLL-AF9
chip antibody
anti-MLL1
Sequenced DNA Library
library_name
GSM846042: MLL1_mouse_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer IIx
Where can I get the processing logs?
Read processing pipeline
log
mm10
Number of total reads
7531825
Reads aligned (%)
83.7
Duplicates removed (%)
8.9
Number of peaks
1555 (qval < 1E-05)
mm9
Number of total reads
7531825
Reads aligned (%)
83.6
Duplicates removed (%)
9.3
Number of peaks
1564 (qval < 1E-05)
Base call quality data from
DBCLS SRA