Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

source_name
input DNA
strain
Va14tg
chip antibody
none

Sequenced DNA Library

library_name
GSM845902: Input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
105935177
Reads aligned (%)
81.6
Duplicates removed (%)
19.0
Number of peaks
901 (qval < 1E-05)

mm9

Number of total reads
105935177
Reads aligned (%)
81.3
Duplicates removed (%)
18.8
Number of peaks
1062 (qval < 1E-05)

Base call quality data from DBCLS SRA