Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Neural
Cell type
Precentral gyrus
NA
NA

Attributes by original data submitter

Sample

source_name
Human female precentral gyrus tissue
tissue
Precentral gyrus
gender
female
age
68
Cause of death
Myocardial decompensation with sepsis
postmortem delay
4.2 hrs
experiment type
ChIP-Seq
chip antibody
H3K4me3 (Millipore 07-473)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Crosslink, Lyse and Immunoprecipitate Illumina Truseq DNA library protocol

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg38

Number of total reads
15986875
Reads aligned (%)
97.6
Duplicates removed (%)
41.9
Number of peaks
13441 (qval < 1E-05)

hg19

Number of total reads
15986875
Reads aligned (%)
95.3
Duplicates removed (%)
46.6
Number of peaks
13432 (qval < 1E-05)

Base call quality data from DBCLS SRA