Antigen

Antigen Class

Histone

Antigen

H3K4me3

Cell type

Cell type Class

Neural

Cell type

Occipital Lobe

MeSH Description

Posterior portion of the CEREBRAL HEMISPHERES responsible for processing visual sensory information. It is located posterior to the parieto-occipital sulcus and extends to the preoccipital notch.

Sample

source_name

Human female occipital pole tissue

tissue

Occipital pole

gender

female

age

68

Cause of death

Myocardial decompensation with sepsis

postmortem delay

4.2 hrs

experiment type

ChIP-Seq

chip antibody

H3K4me3 (Millipore 07-473)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Crosslink, Lyse and Immunoprecipitate Illumina Truseq DNA library protocol

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

12449161

Reads aligned (%)

98.0

Duplicates removed (%)

5.4

Number of peaks

22021 (qval < 1E-05)

hg19

Number of total reads

12449161

Reads aligned (%)

97.0

Duplicates removed (%)

7.2

Number of peaks

22063 (qval < 1E-05)