Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
KDM2B

Cell type

Cell type Class
Blood
Cell type
ALL-SIL
Primary Tissue
Blood
Tissue Diagnosis
Leukemia

Attributes by original data submitter

Sample

source_name
SIL-ALL
cell line
leukemia cell line SIL-ALL
chip antibody
anti-KDM2B (Millipore, catalog# 09-864)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Library preapred according to Illumina's instructions

Sequencing Platform

instrument_model
Illumina HiSeq 2500

hg19

Number of total reads
45850834
Reads aligned (%)
79.4
Duplicates removed (%)
13.0
Number of peaks
1183 (qval < 1E-05)

hg38

Number of total reads
45850834
Reads aligned (%)
81.5
Duplicates removed (%)
11.6
Number of peaks
1128 (qval < 1E-05)

Base call quality data from DBCLS SRA