SRX1085069
GSM1812039: DND41-KDM2B; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
KDM2B

Cell type

Cell type Class
Blood
Cell type
DND-41
Primary Tissue
Blood
Tissue Diagnosis
Leukemia

Attributes by original data submitter

Sample

source_name
DND41
cell line
leukemia cell line DND41
chip antibody
anti-KDM2B (Millipore, catalog# 09-864)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Library preapred according to Illumina's instructions

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
40514884
Reads aligned (%)
97.3
Duplicates removed (%)
2.2
Number of peaks
1331 (qval < 1E-05)

hg19

Number of total reads
40514884
Reads aligned (%)
96.5
Duplicates removed (%)
3.7
Number of peaks
1385 (qval < 1E-05)

Base call quality data from DBCLS SRA