SRX1085065
GSM1812035: REH-KDM2B; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
KDM2B

Cell type

Cell type Class
Blood
Cell type
REH
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Lymphocytic

Attributes by original data submitter

Sample

source_name
REH
cell line
leukemia cell line REH
chip antibody
anti-KDM2B (Millipore, catalog# 09-864)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Library preapred according to Illumina's instructions

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
49551576
Reads aligned (%)
96.5
Duplicates removed (%)
16.4
Number of peaks
824 (qval < 1E-05)

hg19

Number of total reads
49551576
Reads aligned (%)
95.6
Duplicates removed (%)
17.6
Number of peaks
1013 (qval < 1E-05)

Base call quality data from DBCLS SRA