Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
KDM2B

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562
cell line
leukemia cell line K562
chip antibody
anti-KDM2B (Millipore, catalog# 09-864)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Library preapred according to Illumina's instructions

Sequencing Platform

instrument_model
Illumina HiSeq 2500

hg19

Number of total reads
49631497
Reads aligned (%)
22.3
Duplicates removed (%)
73.9
Number of peaks
888 (qval < 1E-05)

hg38

Number of total reads
49631497
Reads aligned (%)
24.3
Duplicates removed (%)
71.8
Number of peaks
771 (qval < 1E-05)

Base call quality data from DBCLS SRA