SRX107300
GSM837999: TAL1 ChIP-seq Prima2 T-ALL 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TAL1

Cell type

Cell type Class
Blood
Cell type
T-ALL
NA
NA

Attributes by original data submitter

Sample

source_name
T-ALL primagraft
chip antibody
TAL1
antibody catalog number
Santa Cruz SC-12984
antibody manufacturer
Santa Cruz
sample type
T-ALL primagraft 05-261

Sequenced DNA Library

library_name
GSM837999: TAL1 ChIP-seq Prima2 T-ALL 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
14237887
Reads aligned (%)
62.7
Duplicates removed (%)
86.2
Number of peaks
62 (qval < 1E-05)

hg19

Number of total reads
14237887
Reads aligned (%)
62.2
Duplicates removed (%)
87.6
Number of peaks
88 (qval < 1E-05)

Base call quality data from DBCLS SRA