Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TCF3

Cell type

Cell type Class
Blood
Cell type
CCRF-CEM
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Lymphocytic

Attributes by original data submitter

Sample

source_name
T-ALL cell line
chip antibody
TCF3/E2A
antibody catalog number
Santa Cruz SC-349
antibody manufacturer
Santa Cruz
cell line
CCRF-CEM

Sequenced DNA Library

library_name
GSM837985: E2A ChIP-seq CCRF-CEM
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
13862254
Reads aligned (%)
22.7
Duplicates removed (%)
72.4
Number of peaks
148 (qval < 1E-05)

hg38

Number of total reads
13862254
Reads aligned (%)
24.3
Duplicates removed (%)
70.8
Number of peaks
112 (qval < 1E-05)

Base call quality data from DBCLS SRA