Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
DUX4

Cell type

Cell type Class
Muscle
Cell type
Myoblasts
MeSH Description
Embryonic (precursor) cells of the myogenic lineage that develop from the MESODERM. They undergo proliferation, migrate to their various sites, and then differentiate into the appropriate form of myocytes (MYOCYTES, SKELETAL; MYOCYTES, CARDIAC; MYOCYTES, SMOOTH MUSCLE).

Attributes by original data submitter

Sample

source_name
untransduced
chip antibody
Combined anti-DUX4 C-terminus rabbit polyclonal antibodies MO488 and MO490
cell type
human myoblasts

Sequenced DNA Library

library_name
GSM837614: untransduced
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg19

Number of total reads
14904855
Reads aligned (%)
74.1
Duplicates removed (%)
12.3
Number of peaks
691 (qval < 1E-05)

hg38

Number of total reads
14904855
Reads aligned (%)
75.9
Duplicates removed (%)
11.1
Number of peaks
480 (qval < 1E-05)

Base call quality data from DBCLS SRA