Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Blood
Cell type
Lymphoblastoid cell line
Tissue
blood
Lineage
mesoderm
Description
parental cell type to lymphoblastoid cell lines

Attributes by original data submitter

Sample

source_name
EBV transformed mononuclear cells from perypherial blood
cell type
Lymphoblastoid cells
cell line id
GM07006
chip antibody
H3K27me3 [Millipore 07-449]

Sequenced DNA Library

library_name
GSM835577: Ctrl_H3K27me3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg38

Number of total reads
46755455
Reads aligned (%)
53.9
Duplicates removed (%)
22.2
Number of peaks
10727 (qval < 1E-05)

hg19

Number of total reads
46755455
Reads aligned (%)
53.5
Duplicates removed (%)
22.7
Number of peaks
11024 (qval < 1E-05)

Base call quality data from DBCLS SRA