SRX106086
GSM835576: WBRdupS H3K27me3; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Blood
Cell type
Lymphoblastoid cells
NA
NA

Attributes by original data submitter

Sample

source_name
EBV transformed mononuclear cells from perypherial blood
cell type
Lymphoblastoid cells
cell line id
AUBLA
chip antibody
H3K27me3 [Millipore 07-449]

Sequenced DNA Library

library_name
GSM835576: WBRdupS_H3K27me3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
48208561
Reads aligned (%)
47.0
Duplicates removed (%)
52.0
Number of peaks
49461 (qval < 1E-05)

hg19

Number of total reads
48208561
Reads aligned (%)
46.6
Duplicates removed (%)
52.6
Number of peaks
53248 (qval < 1E-05)

Base call quality data from DBCLS SRA