SRX106081
GSM835571: WBRdupS H4K20me1; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H4K20me1

Cell type

Cell type Class
Blood
Cell type
Lymphoblastoid cells
NA
NA

Attributes by original data submitter

Sample

source_name
EBV transformed mononuclear cells from perypherial blood
cell type
Lymphoblastoid cells
cell line id
AUBLA
chip antibody
H4K20me1 [Abcam ab9051]

Sequenced DNA Library

library_name
GSM835571: WBRdupS_H4K20me1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
50134455
Reads aligned (%)
76.8
Duplicates removed (%)
32.9
Number of peaks
821 (qval < 1E-05)

hg19

Number of total reads
50134455
Reads aligned (%)
76.2
Duplicates removed (%)
33.8
Number of peaks
1154 (qval < 1E-05)

Base call quality data from DBCLS SRA