Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Kidney

Cell type

293

Primary Tissue

Kidney

Tissue Diagnosis

Normal

Sample

source_name

HEK293

cell type

HEK293

construct

AZF

chip-antibody

none

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Refer to Schmidt D 2009 et al. Methods and Burdach J 2014 et al. NAR. Libraries were prepared according to Illumina's instructions accompanying the TruSeq ChIP sample prep kit from Illumina, San Diego, CA (Cat #: IP-202-1012).

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

15663393

Reads aligned (%)

98.3

Duplicates removed (%)

13.9

Number of peaks

1671 (qval < 1E-05)

hg19

Number of total reads

15663393

Reads aligned (%)

98.0

Duplicates removed (%)

13.9

Number of peaks

1751 (qval < 1E-05)