SRX105450
GSM832315: Runx1 uninduced ChIPseq; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Runx1

Cell type

Cell type Class
Blood
Cell type
L8057
NA
NA

Attributes by original data submitter

Sample

source_name
Runx1_uninduced_ChIPseq
cell line
L8057

Sequenced DNA Library

library_name
GSM832315: Runx1_uninduced_ChIPseq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
30241990
Reads aligned (%)
95.9
Duplicates removed (%)
32.5
Number of peaks
8541 (qval < 1E-05)

mm9

Number of total reads
30241990
Reads aligned (%)
95.7
Duplicates removed (%)
32.6
Number of peaks
8522 (qval < 1E-05)

Base call quality data from DBCLS SRA