SRX105446
GSM832311: Runx1 induced ChIPseq; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Runx1

Cell type

Cell type Class
Blood
Cell type
L8057
NA
NA

Attributes by original data submitter

Sample

source_name
Runx1_induced_ChIPseq
cell line
L8057

Sequenced DNA Library

library_name
GSM832311: Runx1_induced_ChIPseq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
84375629
Reads aligned (%)
96.5
Duplicates removed (%)
50.7
Number of peaks
13434 (qval < 1E-05)

mm9

Number of total reads
84375629
Reads aligned (%)
96.3
Duplicates removed (%)
50.8
Number of peaks
13450 (qval < 1E-05)

Base call quality data from DBCLS SRA