Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Su(z)12

Cell type

Cell type Class
Larvae
Cell type
3rd instar
NA
NA

Attributes by original data submitter

Sample

source_name
whole larvae
tissue
3rd instar larvae
antibody
rb-α-Su(z)12 full length (Jürg Müller)
ChIP
Su(z)12
genotype/variation
Jarid2 mutant

Sequenced DNA Library

library_name
GSM829677: larvae_mb_suz12
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

dm3

Number of total reads
39814481
Reads aligned (%)
57.3
Duplicates removed (%)
37.5
Number of peaks
8794 (qval < 1E-05)

dm6

Number of total reads
39814481
Reads aligned (%)
53.5
Duplicates removed (%)
41.6
Number of peaks
4245 (qval < 1E-05)

Base call quality data from DBCLS SRA