SRX104971
GSM829675: larvae mb jarid2; Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Jarid2

Cell type

Cell type Class
Larvae
Cell type
3rd instar
NA
NA

Attributes by original data submitter

Sample

source_name
whole larvae
tissue
3rd instar larvae
antibody
rb-α-Jarid2 (Masamitsu Yamaguchi)
ChIP
dJarid2
genotype/variation
Jarid2 mutant

Sequenced DNA Library

library_name
GSM829675: larvae_mb_jarid2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
41315553
Reads aligned (%)
91.1
Duplicates removed (%)
48.7
Number of peaks
3096 (qval < 1E-05)

dm3

Number of total reads
41315553
Reads aligned (%)
91.5
Duplicates removed (%)
46.3
Number of peaks
2370 (qval < 1E-05)

Base call quality data from DBCLS SRA