SRX104963
GSM829667: larvae wt1 suz12; Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Su(z)12

Cell type

Cell type Class
Larvae
Cell type
3rd instar
NA
NA

Attributes by original data submitter

Sample

source_name
whole larvae
tissue
3rd instar larvae
antibody
rb-α-Su(z)12 full length (Jürg Müller)
ChIP
Su(z)12
genotype/variation
wild type

Sequenced DNA Library

library_name
GSM829667: larvae_wt1_suz12
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

dm3

Number of total reads
35393095
Reads aligned (%)
71.3
Duplicates removed (%)
18.7
Number of peaks
5524 (qval < 1E-05)

dm6

Number of total reads
35393095
Reads aligned (%)
70.0
Duplicates removed (%)
20.0
Number of peaks
6330 (qval < 1E-05)

Base call quality data from DBCLS SRA