Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
MEF2B

Cell type

Cell type Class
Blood
Cell type
SU-DHL-4
Primary Tissue
Blood
Tissue Diagnosis
Lymphoma B-cell

Attributes by original data submitter

Sample

source_name
SUDHL-4 MEF2B HPA004734
material type
Cell line
transgene
NA
treatment
NA
chip antibody
MEF2B_HPA004734 (Atlas, catalog# HPA004734, lot# R57933)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
60181509
Reads aligned (%)
91.7
Duplicates removed (%)
6.8
Number of peaks
5773 (qval < 1E-05)

hg19

Number of total reads
60181509
Reads aligned (%)
90.7
Duplicates removed (%)
8.4
Number of peaks
5572 (qval < 1E-05)

Base call quality data from DBCLS SRA