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Install and launch IGV before selecting data to visualize
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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Analyze
For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: MEF2B
wikigenes
PDBj
CellType: SU-DHL-4
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
SRX1048491
GSM1703930: SUDHL-4 MEF2B HPA004734; Homo sapiens; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
MEF2B
Cell type
Cell type Class
Blood
Cell type
SU-DHL-4
Primary Tissue
Blood
Tissue Diagnosis
Lymphoma B-cell
Attributes by original data submitter
Sample
source_name
SUDHL-4 MEF2B HPA004734
material type
Cell line
transgene
NA
treatment
NA
chip antibody
MEF2B_HPA004734 (Atlas, catalog# HPA004734, lot# R57933)
Sequenced DNA Library
library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests
Sequencing Platform
instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests
Where can I get the processing logs?
Read processing pipeline
log
hg38
Number of total reads
60181509
Reads aligned (%)
91.7
Duplicates removed (%)
6.8
Number of peaks
5773 (qval < 1E-05)
hg19
Number of total reads
60181509
Reads aligned (%)
90.7
Duplicates removed (%)
8.4
Number of peaks
5572 (qval < 1E-05)
Base call quality data from
DBCLS SRA